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Polish Journal of Microbiology
Polish Society of Microbiologists
Subject: Microbiology
ISSN: 1733-1331
eISSN: 2544-4646
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Morphological and Molecular Characterization of Phoma complanata, a New Causal Agent of Archangelica officinalis Hoffm. in Poland
Beata Zimowska * / Ewa Dorota Zalewska / Ewa Dorota Król / Agnieszka Furmańczyk
Keywords : Phoma complanata, fungus Phoma sensu lato from angelica, ITS rDNA sequences, SEM identification
Citation Information : Polish Journal of Microbiology. VOLUME 66 , ISSUE 2 , ISSN (Online) 2544-4646, DOI: 10.5604/01.3001.0010.7886, June 2017
License : (CC BY-NC-ND 4.0)
Received Date : 02-November-2014 / Accepted: 10-April-2017 / Published Online: 28-June-2017
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ARTICLE
ABSTRACT
The paper concerns the fungus Phoma complanata, isolated for the first time in Poland, from the roots and umbels of angelica (Archangelica officinalis) in 2009. The morphology of fungal isolates was tested on standard culture media. Moreover, the sequence analysis of ITS regions was conducted. Morphological similarity of P. complanata Polish isolates to the reference isolate obtained from CBS culture collection was determined and together with the molecular analysis confirmed the affiliation of the fungus to the species.
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REFERENCES
Aveskamp M.M., J. De Gruyter and P.W. Crous. 2008. Biology and recent developments in the systematics of Phoma, a complex genus of major quarantine significance. Fungal Diversity 31: 1–18.
Aveskamp M.M, J. De Gruyter, J.H.C Woudenberg, G.J.M. Verkley and P.W. Crous. 2010. Highlights of Didymellaceae: A polyphasic approach to characterise Phoma and related pleosporalean genera. Studies in Mycology 65: 1–60.
Balmas V., B. Scherm, S. Ghignone, A.O.M. Salem, S.O. Cacciol and Q. Migheli 2005. Characterization of Phoma tracheiphila by RAPD-PCR, microsatellite-primed PCR Eur. J. Plant Pathol. and ITS rDNA sequencing and development of specific primers for in planta PCR detection. Eur. J. Plant Pathol. 111: 235–247.
Boerema G.H. and G.J. Bollen. 1975. Conidiogenesis and conidial septation as differentiating criteria between Phoma and Ascochyta. Persoonia 8: 111–144.
Boerema G.H., J. De Gruyter, M.E. Noordeloos and M.E.C. Hamers.2004. Phoma identification manual differentiation on specific and intra-specific taxa in culture, p. 470. CAB Publishing.
Błaszczyk L., P. Popiel, J. Chełkowski, G. Koczyk, G.J. Samuels, K. Sobieralski and M. Siwulski. 2011. Species diversity of Trichoderma in Poland. J. App. Genetics 52: 233–243.
Chen Q., J.R. Jiang, G.Z. Zhang, L. Cai, and P.W. Crous. 2015. Resolving the Phoma enigma. Studies in Mycology 82: 137–217.
De Gruyter J. 2012. PhD Thesis. Revised taxonomy of Phoma and allied genera, p. 181. Wageningen University, Wageningen, NL.
Farr D.F., G.F. Bills, G.P. Chamuris and A.Y. Rossman. 1995. Fungi on plants products in the United States. American Phytopath. Society.
Frisvad J.C., B. Anderson and U. Thrane. 2008. The use of secondary metabolite profiling in chemotaxonomy of filamentous. Mycol. Res. 112: 231–240.
Kirk P.M., P.F. Cannon, D.W. Minter and J.A. Stalpers. 2008.Ainsworth and Bisby’s dictionary of the Fungi, p. 508. 10th edition. CABI Europe-UK, CAB International, Wallingford.
Koike S.T., K.V. Subbarao, G.J.M. Verkley, D. Fogle and T.M. O’Neill. 2006. Phoma basal rot of romaine lettuce in California caused by Phoma exigua: Occurrence, characterization and control. Plant Disease 90: 1268–1275.
Rai M.K., V.V. Tivari, L. Irinyi and G.J. Köviecs. 2014. Advances in taxonomy of genus Phoma: polyphyletic nature and role of phenotypic traits and molecular systematics. Indian J. Microbiol. 54(2): 123–128.
Tiwari V.V., A.K. Gade and M. Rai. 2013. A study of phylogenetic variations among Indian Phoma tropica species by RAPD-PCR and ITS-rDNA sequencing. Ind. J. Biotechnol. 12: 187–194.
Uddin W., K.L. Stevenson, R.A. Pardo-Schultheiss and S.A. Rehner. 1998. Pathogenic and molecular characterization of three Phomopsis isolates from peach, plum and Asian pear. Plant Disease 82(7): 732–737.
White T.J., T. Bruns, S. Lee and J. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, pp. 315–322. In: PCR protocols; a quide to methods and amplifications Innis M.A., D.H. Geefand, S.S. Sninsky and T.J. White (eds). Academic Press, San Diego.
Woudemberg J.H.C., M.M. Aveskamp, J. de Gruyter, A.G. Spiers and P.W. Crous. 2009. Multiple Didymella teleomorphs are linked to the Phoma clematidina morphotype. Persoonia 22: 56–62.
Zalewska E., Z. Machowicz-Stefaniak and E. Król. 2013. Occurrence of fungi on the plants of angelica (Archangelica officinalis Hoffm.). Acta Sci. Pol. Hortorum Cultus 12(2): 107–121.