original-paper | 08-September-2020
sample from Saba piglets and two samples from Landrace piglets failed to build a database.
Processing of sequencing data. The sequencing data analysis referred to the method of Li and coworkers (Li et al. 2019). Trimming of barcodes and primers was performed using Pandaseq (https://github.com/neufeld/pandaseq/releases/tag/v2.8.1), followed by the quality control (e.g., the lengths of reads and an average base quality) using Fastqc (http://www.bioinformatics.babraham.ac.uk/projects/fastqc/). 16S rDNA
Polish Journal of Microbiology, Volume 69 , ISSUE 3, 367–378